PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_10411
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 70aa    MW: 8034.07 Da    PI: 11.3635
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_10411genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP272.95.2e-231263156
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                ++y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa+a+++a+++++g+
  PEQU_10411 12 PRYRGVRQRP-WGKWAAEIRDPV----KaARVWLGTFDTAEAAARAYDEAALRFRGN 63
                68********.**********64....55*************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381231.0E-24170IPR017392AP2/ERF transcription factor ERF/PTI6
CDDcd000187.12E-191270No hitNo description
PfamPF008472.1E-161262IPR001471AP2/ERF domain
SMARTSM003805.4E-321370IPR001471AP2/ERF domain
SuperFamilySSF541715.36E-241370IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.3E-341370IPR001471AP2/ERF domain
PROSITE profilePS5103225.7391370IPR001471AP2/ERF domain
PRINTSPR003679.3E-131425IPR001471AP2/ERF domain
PRINTSPR003679.3E-133652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
SPHPDAQTEI RPRYRGVRQR PWGKWAAEIR DPVKAARVWL GTFDTAEAAA RAYDEAALRF  60
RGNRAKLNFP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-251470663ATERF1
3gcc_A9e-251470663ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010096464.11e-34Ethylene-responsive transcription factor
SwissprotQ9FH543e-31EF114_ARATH; Ethylene-responsive transcription factor ERF114
TrEMBLW9RA191e-34W9RA19_9R
STRINGBra037794.1-P8e-32(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.13e-19ethylene response factor 110